Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rdh5O55240 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.08■□□□□ 0.97
Rdh5O55240 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rdh5O55240 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rdh5O55240 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rdh5O55240 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rdh5O55240 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rdh5O55240 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Rdh5O55240 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rdh5O55240 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rdh5O55240 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Rdh5O55240 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rdh5O55240 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.06■□□□□ 0.96
Rdh5O55240 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.06■□□□□ 0.96
Rdh5O55240 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.06■□□□□ 0.96
Rdh5O55240 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
Rdh5O55240 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rdh5O55240 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rdh5O55240 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rdh5O55240 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rdh5O55240 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rdh5O55240 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rdh5O55240 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.04■□□□□ 0.96
Rdh5O55240 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rdh5O55240 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rdh5O55240 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rdh5O55240 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rdh5O55240 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.04■□□□□ 0.96
Rdh5O55240 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rdh5O55240 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rdh5O55240 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rdh5O55240 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rdh5O55240 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Rdh5O55240 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Rdh5O55240 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.02■□□□□ 0.96
Rdh5O55240 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rdh5O55240 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rdh5O55240 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rdh5O55240 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rdh5O55240 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Rdh5O55240 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rdh5O55240 Scarna2-201ENSMUST00000157560 414 ntBASIC21■□□□□ 0.95
Rdh5O55240 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rdh5O55240 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rdh5O55240 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rdh5O55240 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rdh5O55240 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rdh5O55240 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.99■□□□□ 0.95
Rdh5O55240 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rdh5O55240 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rdh5O55240 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.98■□□□□ 0.95
Rdh5O55240 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rdh5O55240 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Rdh5O55240 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Rdh5O55240 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Rdh5O55240 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rdh5O55240 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rdh5O55240 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rdh5O55240 Gm9806-201ENSMUST00000051080 552 ntBASIC20.97■□□□□ 0.95
Rdh5O55240 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rdh5O55240 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.97■□□□□ 0.95
Rdh5O55240 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rdh5O55240 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rdh5O55240 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rdh5O55240 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rdh5O55240 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.96■□□□□ 0.95
Rdh5O55240 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rdh5O55240 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rdh5O55240 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rdh5O55240 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rdh5O55240 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rdh5O55240 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Rdh5O55240 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rdh5O55240 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Rdh5O55240 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rdh5O55240 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.94■□□□□ 0.94
Rdh5O55240 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rdh5O55240 Gm16437-201ENSMUST00000025669 507 ntBASIC20.94■□□□□ 0.94
Rdh5O55240 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rdh5O55240 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rdh5O55240 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rdh5O55240 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rdh5O55240 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rdh5O55240 Cap2-205ENSMUST00000225824 1634 ntBASIC20.93■□□□□ 0.94
Rdh5O55240 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rdh5O55240 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rdh5O55240 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rdh5O55240 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Rdh5O55240 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.92■□□□□ 0.94
Rdh5O55240 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rdh5O55240 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rdh5O55240 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rdh5O55240 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Rdh5O55240 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rdh5O55240 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rdh5O55240 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rdh5O55240 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rdh5O55240 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rdh5O55240 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rdh5O55240 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms