Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.04■■□□□ 1.44
Nr1i3O35627 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Nr1i3O35627 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Nr1i3O35627 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Nr1i3O35627 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Nr1i3O35627 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Nr1i3O35627 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.03■■□□□ 1.44
Nr1i3O35627 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Nr1i3O35627 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Nr1i3O35627 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Nr1i3O35627 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Nr1i3O35627 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Nr1i3O35627 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Nr1i3O35627 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Nr1i3O35627 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Nr1i3O35627 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
Nr1i3O35627 Gm11599-201ENSMUST00000118720 878 ntBASIC24.02■■□□□ 1.44
Nr1i3O35627 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Nr1i3O35627 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Nr1i3O35627 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.02■■□□□ 1.44
Nr1i3O35627 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Nr1i3O35627 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Nr1i3O35627 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.01■■□□□ 1.43
Nr1i3O35627 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Nr1i3O35627 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Nr1i3O35627 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.01■■□□□ 1.43
Nr1i3O35627 Gm45364-201ENSMUST00000210883 159 ntBASIC24.01■■□□□ 1.43
Nr1i3O35627 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Nr1i3O35627 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Nr1i3O35627 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24■■□□□ 1.43
Nr1i3O35627 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24■■□□□ 1.43
Nr1i3O35627 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Nr1i3O35627 Terc-201ENSMUST00000082862 423 ntBASIC23.99■■□□□ 1.43
Nr1i3O35627 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Nr1i3O35627 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Nr1i3O35627 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Nr1i3O35627 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Nr1i3O35627 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Nr1i3O35627 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
Nr1i3O35627 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.97■■□□□ 1.43
Nr1i3O35627 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Nr1i3O35627 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
Nr1i3O35627 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Nr1i3O35627 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Nr1i3O35627 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.96■■□□□ 1.43
Nr1i3O35627 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Nr1i3O35627 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Nr1i3O35627 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Nr1i3O35627 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Nr1i3O35627 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Nr1i3O35627 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
Nr1i3O35627 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Nr1i3O35627 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Nr1i3O35627 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.94■■□□□ 1.42
Nr1i3O35627 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Nr1i3O35627 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Nr1i3O35627 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.94■■□□□ 1.42
Nr1i3O35627 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Nr1i3O35627 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Nr1i3O35627 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Nr1i3O35627 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Nr1i3O35627 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Nr1i3O35627 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Nr1i3O35627 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Nr1i3O35627 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Nr1i3O35627 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Nr1i3O35627 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Nr1i3O35627 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Nr1i3O35627 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Nr1i3O35627 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Nr1i3O35627 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Nr1i3O35627 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Nr1i3O35627 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Nr1i3O35627 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Nr1i3O35627 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Nr1i3O35627 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Nr1i3O35627 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Nr1i3O35627 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Nr1i3O35627 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Nr1i3O35627 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Nr1i3O35627 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Nr1i3O35627 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Nr1i3O35627 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Nr1i3O35627 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.88■■□□□ 1.41
Nr1i3O35627 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.88■■□□□ 1.41
Nr1i3O35627 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Nr1i3O35627 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Nr1i3O35627 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Nr1i3O35627 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Nr1i3O35627 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Nr1i3O35627 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.86■■□□□ 1.41
Nr1i3O35627 Gm22567-201ENSMUST00000175542 342 ntBASIC23.85■■□□□ 1.41
Nr1i3O35627 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Nr1i3O35627 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Nr1i3O35627 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nr1i3O35627 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nr1i3O35627 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nr1i3O35627 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nr1i3O35627 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nr1i3O35627 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms