Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6bO35451 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6bO35451 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6bO35451 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6bO35451 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6bO35451 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.17■□□□□ 0.66
Atf6bO35451 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6bO35451 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6bO35451 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Atf6bO35451 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6bO35451 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Atf6bO35451 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf6bO35451 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.16■□□□□ 0.66
Atf6bO35451 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf6bO35451 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atf6bO35451 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Atf6bO35451 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf6bO35451 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf6bO35451 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf6bO35451 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.15■□□□□ 0.66
Atf6bO35451 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf6bO35451 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf6bO35451 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf6bO35451 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.15■□□□□ 0.66
Atf6bO35451 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Atf6bO35451 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atf6bO35451 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.14■□□□□ 0.66
Atf6bO35451 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf6bO35451 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Atf6bO35451 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Atf6bO35451 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.13■□□□□ 0.65
Atf6bO35451 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atf6bO35451 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Atf6bO35451 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Atf6bO35451 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Atf6bO35451 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf6bO35451 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf6bO35451 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Atf6bO35451 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Atf6bO35451 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf6bO35451 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.11■□□□□ 0.65
Atf6bO35451 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf6bO35451 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf6bO35451 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf6bO35451 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf6bO35451 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Atf6bO35451 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.1■□□□□ 0.65
Atf6bO35451 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf6bO35451 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf6bO35451 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Atf6bO35451 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf6bO35451 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf6bO35451 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.09■□□□□ 0.65
Atf6bO35451 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Atf6bO35451 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.09■□□□□ 0.65
Atf6bO35451 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf6bO35451 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf6bO35451 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Atf6bO35451 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Atf6bO35451 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.09■□□□□ 0.65
Atf6bO35451 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atf6bO35451 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atf6bO35451 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atf6bO35451 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Atf6bO35451 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf6bO35451 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf6bO35451 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6bO35451 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6bO35451 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.07■□□□□ 0.64
Atf6bO35451 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6bO35451 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6bO35451 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
Atf6bO35451 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6bO35451 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Atf6bO35451 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.06■□□□□ 0.64
Atf6bO35451 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.06■□□□□ 0.64
Atf6bO35451 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.05■□□□□ 0.64
Atf6bO35451 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.05■□□□□ 0.64
Atf6bO35451 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.05■□□□□ 0.64
Atf6bO35451 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Atf6bO35451 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Atf6bO35451 Gm27502-201ENSMUST00000183495 199 ntBASIC19.04■□□□□ 0.64
Atf6bO35451 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf6bO35451 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf6bO35451 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf6bO35451 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf6bO35451 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.03■□□□□ 0.64
Atf6bO35451 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Atf6bO35451 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atf6bO35451 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.03■□□□□ 0.64
Atf6bO35451 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.03■□□□□ 0.64
Atf6bO35451 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf6bO35451 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf6bO35451 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf6bO35451 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf6bO35451 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Atf6bO35451 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.02■□□□□ 0.64
Atf6bO35451 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atf6bO35451 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atf6bO35451 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms