Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cx3cl1O35188 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.83■□□□□ 0.92
Cx3cl1O35188 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cx3cl1O35188 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cx3cl1O35188 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.82■□□□□ 0.92
Cx3cl1O35188 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.82■□□□□ 0.92
Cx3cl1O35188 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cx3cl1O35188 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.82■□□□□ 0.92
Cx3cl1O35188 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cx3cl1O35188 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cx3cl1O35188 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cx3cl1O35188 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cx3cl1O35188 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cx3cl1O35188 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cx3cl1O35188 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.81■□□□□ 0.92
Cx3cl1O35188 Gm12366-201ENSMUST00000121722 873 ntBASIC20.81■□□□□ 0.92
Cx3cl1O35188 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.81■□□□□ 0.92
Cx3cl1O35188 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.81■□□□□ 0.92
Cx3cl1O35188 Gm5786-201ENSMUST00000085368 882 ntBASIC20.81■□□□□ 0.92
Cx3cl1O35188 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cx3cl1O35188 Cap2-205ENSMUST00000225824 1634 ntBASIC20.81■□□□□ 0.92
Cx3cl1O35188 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cx3cl1O35188 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cx3cl1O35188 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cx3cl1O35188 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cx3cl1O35188 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cx3cl1O35188 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cx3cl1O35188 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cx3cl1O35188 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cx3cl1O35188 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.79■□□□□ 0.92
Cx3cl1O35188 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cx3cl1O35188 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cx3cl1O35188 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cx3cl1O35188 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cx3cl1O35188 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cx3cl1O35188 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cx3cl1O35188 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cx3cl1O35188 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cx3cl1O35188 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.78■□□□□ 0.92
Cx3cl1O35188 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cx3cl1O35188 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cx3cl1O35188 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cx3cl1O35188 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.78■□□□□ 0.92
Cx3cl1O35188 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cx3cl1O35188 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cx3cl1O35188 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cx3cl1O35188 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cx3cl1O35188 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cx3cl1O35188 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cx3cl1O35188 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cx3cl1O35188 Gm14523-201ENSMUST00000117260 558 ntBASIC20.77■□□□□ 0.92
Cx3cl1O35188 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cx3cl1O35188 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.77■□□□□ 0.92
Cx3cl1O35188 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cx3cl1O35188 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cx3cl1O35188 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cx3cl1O35188 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cx3cl1O35188 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cx3cl1O35188 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.76■□□□□ 0.91
Cx3cl1O35188 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cx3cl1O35188 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cx3cl1O35188 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cx3cl1O35188 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cx3cl1O35188 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cx3cl1O35188 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.75■□□□□ 0.91
Cx3cl1O35188 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.75■□□□□ 0.91
Cx3cl1O35188 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cx3cl1O35188 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cx3cl1O35188 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cx3cl1O35188 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cx3cl1O35188 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cx3cl1O35188 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cx3cl1O35188 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cx3cl1O35188 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cx3cl1O35188 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cx3cl1O35188 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Cx3cl1O35188 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cx3cl1O35188 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cx3cl1O35188 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cx3cl1O35188 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cx3cl1O35188 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cx3cl1O35188 Gm7332-201ENSMUST00000118351 454 ntBASIC20.72■□□□□ 0.91
Cx3cl1O35188 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.72■□□□□ 0.91
Cx3cl1O35188 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cx3cl1O35188 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cx3cl1O35188 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cx3cl1O35188 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cx3cl1O35188 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.71■□□□□ 0.91
Cx3cl1O35188 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cx3cl1O35188 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cx3cl1O35188 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cx3cl1O35188 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cx3cl1O35188 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cx3cl1O35188 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cx3cl1O35188 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cx3cl1O35188 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.7■□□□□ 0.9
Cx3cl1O35188 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.7■□□□□ 0.9
Cx3cl1O35188 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.7■□□□□ 0.9
Cx3cl1O35188 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cx3cl1O35188 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms