Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ercc2O08811 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ercc2O08811 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ercc2O08811 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ercc2O08811 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Ercc2O08811 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ercc2O08811 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ercc2O08811 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.88■■□□□ 1.25
Ercc2O08811 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.88■■□□□ 1.25
Ercc2O08811 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ercc2O08811 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Ercc2O08811 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.87■■□□□ 1.25
Ercc2O08811 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ercc2O08811 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Ercc2O08811 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.86■■□□□ 1.25
Ercc2O08811 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ercc2O08811 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Ercc2O08811 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ercc2O08811 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ercc2O08811 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Ercc2O08811 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Ercc2O08811 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.85■■□□□ 1.25
Ercc2O08811 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ercc2O08811 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ercc2O08811 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ercc2O08811 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ercc2O08811 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ercc2O08811 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ercc2O08811 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ercc2O08811 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ercc2O08811 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ercc2O08811 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ercc2O08811 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Ercc2O08811 Gm44428-201ENSMUST00000204474 874 ntBASIC22.82■■□□□ 1.24
Ercc2O08811 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.82■■□□□ 1.24
Ercc2O08811 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Ercc2O08811 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ercc2O08811 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ercc2O08811 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.81■■□□□ 1.24
Ercc2O08811 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ercc2O08811 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ercc2O08811 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.81■■□□□ 1.24
Ercc2O08811 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
Ercc2O08811 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ercc2O08811 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.8■■□□□ 1.24
Ercc2O08811 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.8■■□□□ 1.24
Ercc2O08811 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ercc2O08811 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ercc2O08811 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.79■■□□□ 1.24
Ercc2O08811 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ercc2O08811 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Ercc2O08811 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ercc2O08811 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ercc2O08811 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.78■■□□□ 1.24
Ercc2O08811 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.78■■□□□ 1.24
Ercc2O08811 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.78■■□□□ 1.24
Ercc2O08811 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.77■■□□□ 1.24
Ercc2O08811 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.77■■□□□ 1.24
Ercc2O08811 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ercc2O08811 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.77■■□□□ 1.24
Ercc2O08811 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ercc2O08811 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ercc2O08811 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ercc2O08811 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ercc2O08811 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ercc2O08811 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ercc2O08811 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ercc2O08811 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ercc2O08811 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Ercc2O08811 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Ercc2O08811 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ercc2O08811 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ercc2O08811 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Ercc2O08811 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Ercc2O08811 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.73■■□□□ 1.23
Ercc2O08811 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ercc2O08811 Mir6538-201ENSMUST00000183713 110 ntBASIC22.73■■□□□ 1.23
Ercc2O08811 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ercc2O08811 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ercc2O08811 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.72■■□□□ 1.23
Ercc2O08811 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ercc2O08811 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Ercc2O08811 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ercc2O08811 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.71■■□□□ 1.23
Ercc2O08811 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ercc2O08811 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Ercc2O08811 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ercc2O08811 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Ercc2O08811 Gm27502-201ENSMUST00000183495 199 ntBASIC22.7■■□□□ 1.22
Ercc2O08811 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ercc2O08811 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ercc2O08811 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Ercc2O08811 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Ercc2O08811 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Ercc2O08811 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ercc2O08811 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ercc2O08811 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Ercc2O08811 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ercc2O08811 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ercc2O08811 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms