Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Polr2jO08740 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Polr2jO08740 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Polr2jO08740 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Polr2jO08740 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.36■■□□□ 1.01
Polr2jO08740 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Polr2jO08740 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Polr2jO08740 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Polr2jO08740 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.35■■□□□ 1.01
Polr2jO08740 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Polr2jO08740 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Polr2jO08740 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Polr2jO08740 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Polr2jO08740 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.34■■□□□ 1.01
Polr2jO08740 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Polr2jO08740 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Polr2jO08740 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Polr2jO08740 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.33■■□□□ 1.01
Polr2jO08740 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Polr2jO08740 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Polr2jO08740 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.33■■□□□ 1
Polr2jO08740 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr2jO08740 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Polr2jO08740 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Polr2jO08740 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.32■■□□□ 1
Polr2jO08740 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr2jO08740 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr2jO08740 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr2jO08740 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.32■■□□□ 1
Polr2jO08740 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Polr2jO08740 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.31■■□□□ 1
Polr2jO08740 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Polr2jO08740 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Polr2jO08740 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.3■■□□□ 1
Polr2jO08740 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Polr2jO08740 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.3■■□□□ 1
Polr2jO08740 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Polr2jO08740 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.29■■□□□ 1
Polr2jO08740 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.29■■□□□ 1
Polr2jO08740 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.29■■□□□ 1
Polr2jO08740 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.29■■□□□ 1
Polr2jO08740 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Polr2jO08740 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Polr2jO08740 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.29■■□□□ 1
Polr2jO08740 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Polr2jO08740 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Polr2jO08740 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.29■■□□□ 1
Polr2jO08740 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Polr2jO08740 Gm6821-201ENSMUST00000107540 542 ntBASIC21.28■■□□□ 1
Polr2jO08740 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.28■■□□□ 1
Polr2jO08740 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Polr2jO08740 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Polr2jO08740 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Polr2jO08740 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.28■■□□□ 1
Polr2jO08740 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Polr2jO08740 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.27■■□□□ 1
Polr2jO08740 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Polr2jO08740 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Polr2jO08740 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.27■■□□□ 1
Polr2jO08740 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Polr2jO08740 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Polr2jO08740 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.26■□□□□ 0.99
Polr2jO08740 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Polr2jO08740 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Polr2jO08740 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Polr2jO08740 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Polr2jO08740 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Polr2jO08740 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Polr2jO08740 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Polr2jO08740 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Polr2jO08740 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Polr2jO08740 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
Polr2jO08740 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Polr2jO08740 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Polr2jO08740 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Polr2jO08740 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.24■□□□□ 0.99
Polr2jO08740 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Polr2jO08740 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Polr2jO08740 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Polr2jO08740 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Polr2jO08740 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Polr2jO08740 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.22■□□□□ 0.99
Polr2jO08740 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.22■□□□□ 0.99
Polr2jO08740 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Polr2jO08740 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Polr2jO08740 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Polr2jO08740 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Polr2jO08740 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.2■□□□□ 0.99
Polr2jO08740 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Polr2jO08740 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.2■□□□□ 0.98
Polr2jO08740 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.2■□□□□ 0.98
Polr2jO08740 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Polr2jO08740 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr2jO08740 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr2jO08740 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Polr2jO08740 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr2jO08740 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.19■□□□□ 0.98
Polr2jO08740 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Polr2jO08740 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr2jO08740 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms