Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Sptbn4E9PX29 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Sptbn4E9PX29 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Sptbn4E9PX29 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sptbn4E9PX29 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.89■□□□□ 0.93
Sptbn4E9PX29 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sptbn4E9PX29 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sptbn4E9PX29 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sptbn4E9PX29 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sptbn4E9PX29 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sptbn4E9PX29 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Sptbn4E9PX29 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.87■□□□□ 0.93
Sptbn4E9PX29 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.87■□□□□ 0.93
Sptbn4E9PX29 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sptbn4E9PX29 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sptbn4E9PX29 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Sptbn4E9PX29 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Sptbn4E9PX29 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sptbn4E9PX29 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.85■□□□□ 0.93
Sptbn4E9PX29 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.85■□□□□ 0.93
Sptbn4E9PX29 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Sptbn4E9PX29 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sptbn4E9PX29 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.84■□□□□ 0.93
Sptbn4E9PX29 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sptbn4E9PX29 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sptbn4E9PX29 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Sptbn4E9PX29 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sptbn4E9PX29 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.83■□□□□ 0.92
Sptbn4E9PX29 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Sptbn4E9PX29 Gm12821-201ENSMUST00000120022 600 ntBASIC20.83■□□□□ 0.92
Sptbn4E9PX29 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Sptbn4E9PX29 Gm8495-201ENSMUST00000188740 694 ntBASIC20.83■□□□□ 0.92
Sptbn4E9PX29 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sptbn4E9PX29 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Sptbn4E9PX29 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sptbn4E9PX29 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sptbn4E9PX29 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.81■□□□□ 0.92
Sptbn4E9PX29 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.81■□□□□ 0.92
Sptbn4E9PX29 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.81■□□□□ 0.92
Sptbn4E9PX29 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sptbn4E9PX29 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sptbn4E9PX29 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.8■□□□□ 0.92
Sptbn4E9PX29 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.8■□□□□ 0.92
Sptbn4E9PX29 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sptbn4E9PX29 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sptbn4E9PX29 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sptbn4E9PX29 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Sptbn4E9PX29 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Sptbn4E9PX29 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sptbn4E9PX29 Gm45417-201ENSMUST00000209533 758 ntBASIC20.78■□□□□ 0.92
Sptbn4E9PX29 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sptbn4E9PX29 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Sptbn4E9PX29 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sptbn4E9PX29 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sptbn4E9PX29 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Sptbn4E9PX29 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sptbn4E9PX29 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.78■□□□□ 0.92
Sptbn4E9PX29 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.77■□□□□ 0.92
Sptbn4E9PX29 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sptbn4E9PX29 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.91
Sptbn4E9PX29 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sptbn4E9PX29 Gm18284-201ENSMUST00000172604 624 ntBASIC20.76■□□□□ 0.91
Sptbn4E9PX29 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Sptbn4E9PX29 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sptbn4E9PX29 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sptbn4E9PX29 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.75■□□□□ 0.91
Sptbn4E9PX29 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sptbn4E9PX29 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sptbn4E9PX29 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.75■□□□□ 0.91
Sptbn4E9PX29 Gm22238-201ENSMUST00000175222 88 ntBASIC20.75■□□□□ 0.91
Sptbn4E9PX29 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sptbn4E9PX29 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
Sptbn4E9PX29 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sptbn4E9PX29 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sptbn4E9PX29 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sptbn4E9PX29 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sptbn4E9PX29 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Sptbn4E9PX29 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sptbn4E9PX29 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sptbn4E9PX29 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sptbn4E9PX29 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sptbn4E9PX29 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
Sptbn4E9PX29 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.72■□□□□ 0.91
Sptbn4E9PX29 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sptbn4E9PX29 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.71■□□□□ 0.91
Sptbn4E9PX29 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sptbn4E9PX29 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Sptbn4E9PX29 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.7■□□□□ 0.9
Sptbn4E9PX29 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sptbn4E9PX29 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sptbn4E9PX29 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sptbn4E9PX29 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sptbn4E9PX29 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sptbn4E9PX29 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sptbn4E9PX29 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sptbn4E9PX29 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sptbn4E9PX29 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sptbn4E9PX29 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
Sptbn4E9PX29 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sptbn4E9PX29 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms