Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
BC035044E0CXF8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BC035044E0CXF8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BC035044E0CXF8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BC035044E0CXF8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BC035044E0CXF8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.03■□□□□ 0.64
BC035044E0CXF8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BC035044E0CXF8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BC035044E0CXF8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
BC035044E0CXF8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BC035044E0CXF8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BC035044E0CXF8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.02■□□□□ 0.64
BC035044E0CXF8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BC035044E0CXF8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BC035044E0CXF8 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.02■□□□□ 0.64
BC035044E0CXF8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BC035044E0CXF8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BC035044E0CXF8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.01■□□□□ 0.63
BC035044E0CXF8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BC035044E0CXF8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BC035044E0CXF8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BC035044E0CXF8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19■□□□□ 0.63
BC035044E0CXF8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19■□□□□ 0.63
BC035044E0CXF8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BC035044E0CXF8 Gm6277-202ENSMUST00000224036 2779 ntBASIC19■□□□□ 0.63
BC035044E0CXF8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19■□□□□ 0.63
BC035044E0CXF8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BC035044E0CXF8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.99■□□□□ 0.63
BC035044E0CXF8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BC035044E0CXF8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BC035044E0CXF8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BC035044E0CXF8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.99■□□□□ 0.63
BC035044E0CXF8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BC035044E0CXF8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
BC035044E0CXF8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BC035044E0CXF8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BC035044E0CXF8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BC035044E0CXF8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BC035044E0CXF8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BC035044E0CXF8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BC035044E0CXF8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BC035044E0CXF8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BC035044E0CXF8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BC035044E0CXF8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BC035044E0CXF8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BC035044E0CXF8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BC035044E0CXF8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
BC035044E0CXF8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
BC035044E0CXF8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.95■□□□□ 0.62
BC035044E0CXF8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BC035044E0CXF8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
BC035044E0CXF8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
BC035044E0CXF8 Gm6821-201ENSMUST00000107540 542 ntBASIC18.94■□□□□ 0.62
BC035044E0CXF8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BC035044E0CXF8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
BC035044E0CXF8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BC035044E0CXF8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BC035044E0CXF8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BC035044E0CXF8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BC035044E0CXF8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BC035044E0CXF8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BC035044E0CXF8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BC035044E0CXF8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BC035044E0CXF8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BC035044E0CXF8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BC035044E0CXF8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.93■□□□□ 0.62
BC035044E0CXF8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BC035044E0CXF8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
BC035044E0CXF8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
BC035044E0CXF8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.92■□□□□ 0.62
BC035044E0CXF8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
BC035044E0CXF8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
BC035044E0CXF8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BC035044E0CXF8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.91■□□□□ 0.62
BC035044E0CXF8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BC035044E0CXF8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BC035044E0CXF8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.91■□□□□ 0.62
BC035044E0CXF8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.91■□□□□ 0.62
BC035044E0CXF8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BC035044E0CXF8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BC035044E0CXF8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
BC035044E0CXF8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
BC035044E0CXF8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BC035044E0CXF8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BC035044E0CXF8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BC035044E0CXF8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.9■□□□□ 0.62
BC035044E0CXF8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BC035044E0CXF8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BC035044E0CXF8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.89■□□□□ 0.62
BC035044E0CXF8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BC035044E0CXF8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BC035044E0CXF8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BC035044E0CXF8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BC035044E0CXF8 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.88■□□□□ 0.61
BC035044E0CXF8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.87■□□□□ 0.61
BC035044E0CXF8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
BC035044E0CXF8 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.86■□□□□ 0.61
BC035044E0CXF8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BC035044E0CXF8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
BC035044E0CXF8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms