Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav12-1A0N8R1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav12-1A0N8R1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav12-1A0N8R1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Trav12-1A0N8R1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.63■□□□□ 0.57
Trav12-1A0N8R1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav12-1A0N8R1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav12-1A0N8R1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav12-1A0N8R1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav12-1A0N8R1 Gm6821-201ENSMUST00000107540 542 ntBASIC18.62■□□□□ 0.57
Trav12-1A0N8R1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav12-1A0N8R1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.61■□□□□ 0.57
Trav12-1A0N8R1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav12-1A0N8R1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav12-1A0N8R1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav12-1A0N8R1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav12-1A0N8R1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.61■□□□□ 0.57
Trav12-1A0N8R1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Trav12-1A0N8R1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav12-1A0N8R1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav12-1A0N8R1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav12-1A0N8R1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav12-1A0N8R1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav12-1A0N8R1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav12-1A0N8R1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav12-1A0N8R1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav12-1A0N8R1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.6■□□□□ 0.57
Trav12-1A0N8R1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav12-1A0N8R1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.59■□□□□ 0.57
Trav12-1A0N8R1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav12-1A0N8R1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav12-1A0N8R1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav12-1A0N8R1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav12-1A0N8R1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.58■□□□□ 0.56
Trav12-1A0N8R1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav12-1A0N8R1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.58■□□□□ 0.56
Trav12-1A0N8R1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav12-1A0N8R1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.57■□□□□ 0.56
Trav12-1A0N8R1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trav12-1A0N8R1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Trav12-1A0N8R1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav12-1A0N8R1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav12-1A0N8R1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.57■□□□□ 0.56
Trav12-1A0N8R1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav12-1A0N8R1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav12-1A0N8R1 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.56■□□□□ 0.56
Trav12-1A0N8R1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav12-1A0N8R1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav12-1A0N8R1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.56■□□□□ 0.56
Trav12-1A0N8R1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.56■□□□□ 0.56
Trav12-1A0N8R1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trav12-1A0N8R1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav12-1A0N8R1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav12-1A0N8R1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav12-1A0N8R1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Trav12-1A0N8R1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav12-1A0N8R1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.55■□□□□ 0.56
Trav12-1A0N8R1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav12-1A0N8R1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav12-1A0N8R1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.55■□□□□ 0.56
Trav12-1A0N8R1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav12-1A0N8R1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trav12-1A0N8R1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav12-1A0N8R1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trav12-1A0N8R1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav12-1A0N8R1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
Trav12-1A0N8R1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav12-1A0N8R1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav12-1A0N8R1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav12-1A0N8R1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trav12-1A0N8R1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trav12-1A0N8R1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav12-1A0N8R1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav12-1A0N8R1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav12-1A0N8R1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.51■□□□□ 0.55
Trav12-1A0N8R1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav12-1A0N8R1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trav12-1A0N8R1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav12-1A0N8R1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trav12-1A0N8R1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav12-1A0N8R1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.5■□□□□ 0.55
Trav12-1A0N8R1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.5■□□□□ 0.55
Trav12-1A0N8R1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav12-1A0N8R1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.5■□□□□ 0.55
Trav12-1A0N8R1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.5■□□□□ 0.55
Trav12-1A0N8R1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Trav12-1A0N8R1 Gm4799-201ENSMUST00000095396 657 ntBASIC18.5■□□□□ 0.55
Trav12-1A0N8R1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav12-1A0N8R1 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.5■□□□□ 0.55
Trav12-1A0N8R1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav12-1A0N8R1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav12-1A0N8R1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav12-1A0N8R1 Gm8503-201ENSMUST00000118131 455 ntBASIC18.49■□□□□ 0.55
Trav12-1A0N8R1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav12-1A0N8R1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav12-1A0N8R1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trav12-1A0N8R1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav12-1A0N8R1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Trav12-1A0N8R1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trav12-1A0N8R1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms