Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3880A0A1B0GSB3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Gm3880A0A1B0GSB3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Gm3880A0A1B0GSB3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm3880A0A1B0GSB3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm3880A0A1B0GSB3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gm3880A0A1B0GSB3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gm3880A0A1B0GSB3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gm3880A0A1B0GSB3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Gm3880A0A1B0GSB3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Gm3880A0A1B0GSB3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm3880A0A1B0GSB3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC11.2□□□□□ -0.62
Gm3880A0A1B0GSB3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm3880A0A1B0GSB3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm3880A0A1B0GSB3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Gm3880A0A1B0GSB3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Gm3880A0A1B0GSB3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Gm3880A0A1B0GSB3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Gm3880A0A1B0GSB3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm3880A0A1B0GSB3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Gm3880A0A1B0GSB3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm3880A0A1B0GSB3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3880A0A1B0GSB3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC11.19□□□□□ -0.62
Gm3880A0A1B0GSB3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Gm3880A0A1B0GSB3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3880A0A1B0GSB3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3880A0A1B0GSB3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Gm3880A0A1B0GSB3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3880A0A1B0GSB3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3880A0A1B0GSB3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3880A0A1B0GSB3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3880A0A1B0GSB3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3880A0A1B0GSB3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3880A0A1B0GSB3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Gm3880A0A1B0GSB3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3880A0A1B0GSB3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3880A0A1B0GSB3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3880A0A1B0GSB3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3880A0A1B0GSB3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3880A0A1B0GSB3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3880A0A1B0GSB3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3880A0A1B0GSB3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm3880A0A1B0GSB3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm3880A0A1B0GSB3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gm3880A0A1B0GSB3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC11.17□□□□□ -0.62
Gm3880A0A1B0GSB3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Gm3880A0A1B0GSB3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm3880A0A1B0GSB3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Gm3880A0A1B0GSB3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Gm3880A0A1B0GSB3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm3880A0A1B0GSB3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gm3880A0A1B0GSB3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm3880A0A1B0GSB3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm3880A0A1B0GSB3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm3880A0A1B0GSB3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm3880A0A1B0GSB3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Gm3880A0A1B0GSB3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm3880A0A1B0GSB3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Gm3880A0A1B0GSB3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Gm3880A0A1B0GSB3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm3880A0A1B0GSB3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm3880A0A1B0GSB3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm3880A0A1B0GSB3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm3880A0A1B0GSB3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Gm3880A0A1B0GSB3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Gm3880A0A1B0GSB3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm3880A0A1B0GSB3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Gm3880A0A1B0GSB3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm3880A0A1B0GSB3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Gm3880A0A1B0GSB3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm3880A0A1B0GSB3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm3880A0A1B0GSB3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm3880A0A1B0GSB3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm3880A0A1B0GSB3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm3880A0A1B0GSB3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Gm3880A0A1B0GSB3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm3880A0A1B0GSB3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC11.13□□□□□ -0.63
Gm3880A0A1B0GSB3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm3880A0A1B0GSB3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm3880A0A1B0GSB3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm3880A0A1B0GSB3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm3880A0A1B0GSB3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm3880A0A1B0GSB3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm3880A0A1B0GSB3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm3880A0A1B0GSB3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm3880A0A1B0GSB3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm3880A0A1B0GSB3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm3880A0A1B0GSB3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm3880A0A1B0GSB3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm3880A0A1B0GSB3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Gm3880A0A1B0GSB3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm3880A0A1B0GSB3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Gm3880A0A1B0GSB3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm3880A0A1B0GSB3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm3880A0A1B0GSB3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Gm3880A0A1B0GSB3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC11.11□□□□□ -0.63
Gm3880A0A1B0GSB3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Gm3880A0A1B0GSB3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm3880A0A1B0GSB3 Gm24109-201ENSMUST00000175489 103 ntBASIC11.11□□□□□ -0.63
Gm3880A0A1B0GSB3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms