Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Igkv6-25A0A140T8N7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Igkv6-25A0A140T8N7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Igkv6-25A0A140T8N7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Igkv6-25A0A140T8N7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Igkv6-25A0A140T8N7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Igkv6-25A0A140T8N7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Igkv6-25A0A140T8N7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Igkv6-25A0A140T8N7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Igkv6-25A0A140T8N7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Igkv6-25A0A140T8N7 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.16■□□□□ 0.98
Igkv6-25A0A140T8N7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Igkv6-25A0A140T8N7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Igkv6-25A0A140T8N7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Igkv6-25A0A140T8N7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Igkv6-25A0A140T8N7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Igkv6-25A0A140T8N7 Gm13238-201ENSMUST00000117655 780 ntBASIC21.15■□□□□ 0.98
Igkv6-25A0A140T8N7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.15■□□□□ 0.98
Igkv6-25A0A140T8N7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Igkv6-25A0A140T8N7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Igkv6-25A0A140T8N7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Igkv6-25A0A140T8N7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Igkv6-25A0A140T8N7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Igkv6-25A0A140T8N7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.14■□□□□ 0.97
Igkv6-25A0A140T8N7 Gm43566-201ENSMUST00000196851 808 ntBASIC21.14■□□□□ 0.97
Igkv6-25A0A140T8N7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Igkv6-25A0A140T8N7 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Igkv6-25A0A140T8N7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Igkv6-25A0A140T8N7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.13■□□□□ 0.97
Igkv6-25A0A140T8N7 Gm45444-201ENSMUST00000211394 898 ntBASIC21.13■□□□□ 0.97
Igkv6-25A0A140T8N7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Igkv6-25A0A140T8N7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Igkv6-25A0A140T8N7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Igkv6-25A0A140T8N7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Igkv6-25A0A140T8N7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Igkv6-25A0A140T8N7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.12■□□□□ 0.97
Igkv6-25A0A140T8N7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Igkv6-25A0A140T8N7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Igkv6-25A0A140T8N7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Igkv6-25A0A140T8N7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv6-25A0A140T8N7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv6-25A0A140T8N7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv6-25A0A140T8N7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv6-25A0A140T8N7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv6-25A0A140T8N7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Igkv6-25A0A140T8N7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv6-25A0A140T8N7 Gm15546-201ENSMUST00000122095 826 ntBASIC21.1■□□□□ 0.97
Igkv6-25A0A140T8N7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv6-25A0A140T8N7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.1■□□□□ 0.97
Igkv6-25A0A140T8N7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv6-25A0A140T8N7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
Igkv6-25A0A140T8N7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.1■□□□□ 0.97
Igkv6-25A0A140T8N7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv6-25A0A140T8N7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv6-25A0A140T8N7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv6-25A0A140T8N7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv6-25A0A140T8N7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv6-25A0A140T8N7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Igkv6-25A0A140T8N7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Igkv6-25A0A140T8N7 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.08■□□□□ 0.97
Igkv6-25A0A140T8N7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.07■□□□□ 0.96
Igkv6-25A0A140T8N7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.07■□□□□ 0.96
Igkv6-25A0A140T8N7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Igkv6-25A0A140T8N7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Igkv6-25A0A140T8N7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Igkv6-25A0A140T8N7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv6-25A0A140T8N7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Igkv6-25A0A140T8N7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.06■□□□□ 0.96
Igkv6-25A0A140T8N7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv6-25A0A140T8N7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv6-25A0A140T8N7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv6-25A0A140T8N7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Igkv6-25A0A140T8N7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv6-25A0A140T8N7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.05■□□□□ 0.96
Igkv6-25A0A140T8N7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv6-25A0A140T8N7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Igkv6-25A0A140T8N7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv6-25A0A140T8N7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Igkv6-25A0A140T8N7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.04■□□□□ 0.96
Igkv6-25A0A140T8N7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Igkv6-25A0A140T8N7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Igkv6-25A0A140T8N7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv6-25A0A140T8N7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Igkv6-25A0A140T8N7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv6-25A0A140T8N7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv6-25A0A140T8N7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Igkv6-25A0A140T8N7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Igkv6-25A0A140T8N7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Igkv6-25A0A140T8N7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Igkv6-25A0A140T8N7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Igkv6-25A0A140T8N7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv6-25A0A140T8N7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv6-25A0A140T8N7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
Igkv6-25A0A140T8N7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.01■□□□□ 0.95
Igkv6-25A0A140T8N7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv6-25A0A140T8N7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv6-25A0A140T8N7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv6-25A0A140T8N7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Igkv6-25A0A140T8N7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv6-25A0A140T8N7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 388.5 ms