Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7-1A0A0G2JEV5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav7-1A0A0G2JEV5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav7-1A0A0G2JEV5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav7-1A0A0G2JEV5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7-1A0A0G2JEV5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7-1A0A0G2JEV5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.12■□□□□ 0.33
Trav7-1A0A0G2JEV5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav7-1A0A0G2JEV5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7-1A0A0G2JEV5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7-1A0A0G2JEV5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7-1A0A0G2JEV5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7-1A0A0G2JEV5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trav7-1A0A0G2JEV5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7-1A0A0G2JEV5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7-1A0A0G2JEV5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7-1A0A0G2JEV5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav7-1A0A0G2JEV5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7-1A0A0G2JEV5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7-1A0A0G2JEV5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7-1A0A0G2JEV5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7-1A0A0G2JEV5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trav7-1A0A0G2JEV5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav7-1A0A0G2JEV5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav7-1A0A0G2JEV5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7-1A0A0G2JEV5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7-1A0A0G2JEV5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Trav7-1A0A0G2JEV5 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.08■□□□□ 0.32
Trav7-1A0A0G2JEV5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7-1A0A0G2JEV5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7-1A0A0G2JEV5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7-1A0A0G2JEV5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7-1A0A0G2JEV5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7-1A0A0G2JEV5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7-1A0A0G2JEV5 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.07■□□□□ 0.32
Trav7-1A0A0G2JEV5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7-1A0A0G2JEV5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Trav7-1A0A0G2JEV5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav7-1A0A0G2JEV5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7-1A0A0G2JEV5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7-1A0A0G2JEV5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav7-1A0A0G2JEV5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.06■□□□□ 0.32
Trav7-1A0A0G2JEV5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav7-1A0A0G2JEV5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7-1A0A0G2JEV5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav7-1A0A0G2JEV5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7-1A0A0G2JEV5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7-1A0A0G2JEV5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7-1A0A0G2JEV5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7-1A0A0G2JEV5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7-1A0A0G2JEV5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7-1A0A0G2JEV5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7-1A0A0G2JEV5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7-1A0A0G2JEV5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7-1A0A0G2JEV5 Gm6821-201ENSMUST00000107540 542 ntBASIC17.04■□□□□ 0.32
Trav7-1A0A0G2JEV5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7-1A0A0G2JEV5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav7-1A0A0G2JEV5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7-1A0A0G2JEV5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7-1A0A0G2JEV5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7-1A0A0G2JEV5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav7-1A0A0G2JEV5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7-1A0A0G2JEV5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7-1A0A0G2JEV5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7-1A0A0G2JEV5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7-1A0A0G2JEV5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav7-1A0A0G2JEV5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav7-1A0A0G2JEV5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav7-1A0A0G2JEV5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav7-1A0A0G2JEV5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav7-1A0A0G2JEV5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav7-1A0A0G2JEV5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav7-1A0A0G2JEV5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.02■□□□□ 0.31
Trav7-1A0A0G2JEV5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-1A0A0G2JEV5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-1A0A0G2JEV5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-1A0A0G2JEV5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-1A0A0G2JEV5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-1A0A0G2JEV5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.01■□□□□ 0.31
Trav7-1A0A0G2JEV5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-1A0A0G2JEV5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-1A0A0G2JEV5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav7-1A0A0G2JEV5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav7-1A0A0G2JEV5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav7-1A0A0G2JEV5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trav7-1A0A0G2JEV5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav7-1A0A0G2JEV5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav7-1A0A0G2JEV5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav7-1A0A0G2JEV5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.99■□□□□ 0.31
Trav7-1A0A0G2JEV5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7-1A0A0G2JEV5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav7-1A0A0G2JEV5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7-1A0A0G2JEV5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7-1A0A0G2JEV5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7-1A0A0G2JEV5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7-1A0A0G2JEV5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7-1A0A0G2JEV5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7-1A0A0G2JEV5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7-1A0A0G2JEV5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav7-1A0A0G2JEV5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms