Protein–RNA interactions for Protein: A0A087WSL9

Gm28539, Predicted gene 28539, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28539A0A087WSL9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28539A0A087WSL9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28539A0A087WSL9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm28539A0A087WSL9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.36□□□□□ -0.11
Gm28539A0A087WSL9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28539A0A087WSL9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28539A0A087WSL9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28539A0A087WSL9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28539A0A087WSL9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28539A0A087WSL9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gm28539A0A087WSL9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28539A0A087WSL9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm28539A0A087WSL9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28539A0A087WSL9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28539A0A087WSL9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28539A0A087WSL9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm28539A0A087WSL9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.35□□□□□ -0.11
Gm28539A0A087WSL9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28539A0A087WSL9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28539A0A087WSL9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28539A0A087WSL9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28539A0A087WSL9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28539A0A087WSL9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28539A0A087WSL9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28539A0A087WSL9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm28539A0A087WSL9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm28539A0A087WSL9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28539A0A087WSL9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28539A0A087WSL9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28539A0A087WSL9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28539A0A087WSL9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Gm28539A0A087WSL9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28539A0A087WSL9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28539A0A087WSL9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28539A0A087WSL9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28539A0A087WSL9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28539A0A087WSL9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.32□□□□□ -0.12
Gm28539A0A087WSL9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28539A0A087WSL9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Gm28539A0A087WSL9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gm28539A0A087WSL9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28539A0A087WSL9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28539A0A087WSL9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28539A0A087WSL9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28539A0A087WSL9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28539A0A087WSL9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28539A0A087WSL9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28539A0A087WSL9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28539A0A087WSL9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28539A0A087WSL9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28539A0A087WSL9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm28539A0A087WSL9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28539A0A087WSL9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28539A0A087WSL9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28539A0A087WSL9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Gm28539A0A087WSL9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28539A0A087WSL9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28539A0A087WSL9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28539A0A087WSL9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28539A0A087WSL9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28539A0A087WSL9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28539A0A087WSL9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28539A0A087WSL9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28539A0A087WSL9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28539A0A087WSL9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Gm28539A0A087WSL9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Gm28539A0A087WSL9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28539A0A087WSL9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28539A0A087WSL9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Gm28539A0A087WSL9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28539A0A087WSL9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28539A0A087WSL9 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.27□□□□□ -0.12
Gm28539A0A087WSL9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28539A0A087WSL9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28539A0A087WSL9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28539A0A087WSL9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28539A0A087WSL9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28539A0A087WSL9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Gm28539A0A087WSL9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28539A0A087WSL9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28539A0A087WSL9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28539A0A087WSL9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28539A0A087WSL9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28539A0A087WSL9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28539A0A087WSL9 Rab21-202ENSMUST00000218831 843 ntBASIC14.25□□□□□ -0.13
Gm28539A0A087WSL9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28539A0A087WSL9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28539A0A087WSL9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28539A0A087WSL9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28539A0A087WSL9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Gm28539A0A087WSL9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28539A0A087WSL9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28539A0A087WSL9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28539A0A087WSL9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gm28539A0A087WSL9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28539A0A087WSL9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Gm28539A0A087WSL9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28539A0A087WSL9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28539A0A087WSL9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28539A0A087WSL9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms