Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb3S4R1G7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
H2afb3S4R1G7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Gm18489-201ENSMUST00000172565 551 ntBASIC13.39□□□□□ -0.27
H2afb3S4R1G7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb3S4R1G7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Gm7977-201ENSMUST00000193787 748 ntBASIC13.38□□□□□ -0.27
H2afb3S4R1G7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms