Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ap4s1Q9WVL1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ap4s1Q9WVL1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ap4s1Q9WVL1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ap4s1Q9WVL1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ap4s1Q9WVL1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ap4s1Q9WVL1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.27□□□□□ -0.12
Ap4s1Q9WVL1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ap4s1Q9WVL1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ap4s1Q9WVL1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ap4s1Q9WVL1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Gm9172-201ENSMUST00000212092 954 ntBASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ap4s1Q9WVL1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Ap4s1Q9WVL1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.25□□□□□ -0.13
Ap4s1Q9WVL1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ap4s1Q9WVL1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.25□□□□□ -0.13
Ap4s1Q9WVL1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ap4s1Q9WVL1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ap4s1Q9WVL1 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.25□□□□□ -0.13
Ap4s1Q9WVL1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ap4s1Q9WVL1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ap4s1Q9WVL1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ap4s1Q9WVL1 Gm15039-201ENSMUST00000118914 875 ntBASIC14.25□□□□□ -0.13
Ap4s1Q9WVL1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ap4s1Q9WVL1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ap4s1Q9WVL1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.25□□□□□ -0.13
Ap4s1Q9WVL1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ap4s1Q9WVL1 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms