Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.14□□□□□ -0.15
Lhx9Q9WUH2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.14□□□□□ -0.15
Lhx9Q9WUH2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx9Q9WUH2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx9Q9WUH2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Gm25948-201ENSMUST00000175334 112 ntBASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx9Q9WUH2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lhx9Q9WUH2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms