Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx5Q9JL61 Gm18889-201ENSMUST00000174284 929 ntBASIC15.71■□□□□ 0.11
Rfx5Q9JL61 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.71■□□□□ 0.11
Rfx5Q9JL61 Gm27920-201ENSMUST00000183953 96 ntBASIC15.71■□□□□ 0.11
Rfx5Q9JL61 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rfx5Q9JL61 Gm2451-201ENSMUST00000199447 999 ntBASIC15.71■□□□□ 0.11
Rfx5Q9JL61 Gm10290-201ENSMUST00000200451 999 ntBASIC15.71■□□□□ 0.11
Rfx5Q9JL61 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.71■□□□□ 0.11
Rfx5Q9JL61 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx5Q9JL61 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx5Q9JL61 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx5Q9JL61 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rfx5Q9JL61 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx5Q9JL61 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rfx5Q9JL61 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx5Q9JL61 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rfx5Q9JL61 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rfx5Q9JL61 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Rprl2-201ENSMUST00000157150 290 ntBASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Gm44335-201ENSMUST00000196879 141 ntBASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Gm44297-201ENSMUST00000198304 141 ntBASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Gm44346-201ENSMUST00000198851 141 ntBASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Gm5867-201ENSMUST00000063197 592 ntBASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx5Q9JL61 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx5Q9JL61 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.69■□□□□ 0.1
Rfx5Q9JL61 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Mir6990-201ENSMUST00000183724 91 ntBASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rfx5Q9JL61 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms