Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Gm29541-201ENSMUST00000191351 678 ntBASIC17.65■□□□□ 0.42
Ube3bQ9ES34 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Gm44872-201ENSMUST00000207864 420 ntBASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Gm18049-201ENSMUST00000208909 581 ntBASIC17.65■□□□□ 0.42
Ube3bQ9ES34 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3bQ9ES34 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Ube3bQ9ES34 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ube3bQ9ES34 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3bQ9ES34 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Gm22175-201ENSMUST00000175007 78 ntBASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Gm15823-201ENSMUST00000064305 670 ntBASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.63■□□□□ 0.41
Ube3bQ9ES34 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms