Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tubb3Q9ERD7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Gm15358-201ENSMUST00000119249 520 ntBASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubb3Q9ERD7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Gm14494-201ENSMUST00000118786 435 ntBASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tubb3Q9ERD7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tubb3Q9ERD7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms