Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rtp4Q9ER80 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Gm12134-201ENSMUST00000122109 520 ntBASIC13.95□□□□□ -0.18
Rtp4Q9ER80 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rtp4Q9ER80 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Gm45747-201ENSMUST00000212203 999 ntBASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rtp4Q9ER80 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Gm5177-201ENSMUST00000183092 997 ntBASIC13.93□□□□□ -0.18
Rtp4Q9ER80 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Gm18246-201ENSMUST00000221023 728 ntBASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.93□□□□□ -0.18
Rtp4Q9ER80 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtp4Q9ER80 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtp4Q9ER80 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.92□□□□□ -0.18
Rtp4Q9ER80 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms