Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Gm23547-201ENSMUST00000158210 271 ntBASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Gm8000-201ENSMUST00000188378 592 ntBASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a3bpQ9EQG9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Gm11779-201ENSMUST00000118541 368 ntBASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a3bpQ9EQG9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Gm45167-201ENSMUST00000208007 322 ntBASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a3bpQ9EQG9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms