Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm9445-201ENSMUST00000207454 1285 ntBASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Gm11793-201ENSMUST00000120433 981 ntBASIC16.68■□□□□ 0.26
Upf1Q9EPU0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Gm8099-201ENSMUST00000200510 742 ntBASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Olfr284-202ENSMUST00000206647 966 ntBASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf1Q9EPU0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Gm10339-203ENSMUST00000225409 1671 ntBASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Gm21470-201ENSMUST00000187680 696 ntBASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Gm19078-201ENSMUST00000206311 727 ntBASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upf1Q9EPU0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Gm24255-201ENSMUST00000104481 128 ntBASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upf1Q9EPU0 B9d1os-201ENSMUST00000137010 674 ntBASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Gm17376-201ENSMUST00000166016 84 ntBASIC16.66■□□□□ 0.26
Upf1Q9EPU0 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Gm5425-201ENSMUST00000214125 459 ntBASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upf1Q9EPU0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Upf1Q9EPU0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Gm43947-201ENSMUST00000203019 959 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms