Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgn3Q9DCB1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Gm21559-201ENSMUST00000220638 855 ntBASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Gm8587-201ENSMUST00000076538 843 ntBASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgn3Q9DCB1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn3Q9DCB1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Gm22697-201ENSMUST00000175194 63 ntBASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Gm37722-201ENSMUST00000193757 208 ntBASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Gm19164-201ENSMUST00000210667 640 ntBASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Gm18101-201ENSMUST00000215769 548 ntBASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn3Q9DCB1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.96□□□□□ -0.18
Hmgn3Q9DCB1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.96□□□□□ -0.18
Hmgn3Q9DCB1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms