Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC19.55■□□□□ 0.72
U2af1Q9D883 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
U2af1Q9D883 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
U2af1Q9D883 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
U2af1Q9D883 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.55■□□□□ 0.72
U2af1Q9D883 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
U2af1Q9D883 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
U2af1Q9D883 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC19.55■□□□□ 0.72
U2af1Q9D883 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
U2af1Q9D883 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.55■□□□□ 0.72
U2af1Q9D883 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.55■□□□□ 0.72
U2af1Q9D883 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.55■□□□□ 0.72
U2af1Q9D883 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
U2af1Q9D883 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC19.55■□□□□ 0.72
U2af1Q9D883 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC19.55■□□□□ 0.72
U2af1Q9D883 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
U2af1Q9D883 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
U2af1Q9D883 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.55■□□□□ 0.72
U2af1Q9D883 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.55■□□□□ 0.72
U2af1Q9D883 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
U2af1Q9D883 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
U2af1Q9D883 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
U2af1Q9D883 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
U2af1Q9D883 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
U2af1Q9D883 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
U2af1Q9D883 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
U2af1Q9D883 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC19.55■□□□□ 0.72
U2af1Q9D883 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
U2af1Q9D883 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.55■□□□□ 0.72
U2af1Q9D883 Tcf21-202ENSMUST00000218002 1788 ntBASIC19.55■□□□□ 0.72
U2af1Q9D883 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
U2af1Q9D883 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
U2af1Q9D883 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
U2af1Q9D883 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
U2af1Q9D883 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
U2af1Q9D883 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
U2af1Q9D883 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
U2af1Q9D883 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC19.54■□□□□ 0.72
U2af1Q9D883 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
U2af1Q9D883 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
U2af1Q9D883 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
U2af1Q9D883 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.54■□□□□ 0.72
U2af1Q9D883 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
U2af1Q9D883 Gm11543-201ENSMUST00000120758 370 ntBASIC19.54■□□□□ 0.72
U2af1Q9D883 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
U2af1Q9D883 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
U2af1Q9D883 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.54■□□□□ 0.72
U2af1Q9D883 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
U2af1Q9D883 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.54■□□□□ 0.72
U2af1Q9D883 Klk2-ps-201ENSMUST00000205342 571 ntBASIC19.54■□□□□ 0.72
U2af1Q9D883 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
U2af1Q9D883 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
U2af1Q9D883 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
U2af1Q9D883 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
U2af1Q9D883 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
U2af1Q9D883 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
U2af1Q9D883 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
U2af1Q9D883 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC19.53■□□□□ 0.72
U2af1Q9D883 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.53■□□□□ 0.72
U2af1Q9D883 Gm27920-201ENSMUST00000183953 96 ntBASIC19.53■□□□□ 0.72
U2af1Q9D883 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
U2af1Q9D883 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
U2af1Q9D883 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
U2af1Q9D883 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2af1Q9D883 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
U2af1Q9D883 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2af1Q9D883 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2af1Q9D883 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.52■□□□□ 0.72
U2af1Q9D883 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2af1Q9D883 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2af1Q9D883 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2af1Q9D883 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2af1Q9D883 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
U2af1Q9D883 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2af1Q9D883 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
U2af1Q9D883 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2af1Q9D883 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2af1Q9D883 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC19.52■□□□□ 0.72
U2af1Q9D883 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
U2af1Q9D883 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.52■□□□□ 0.72
U2af1Q9D883 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
U2af1Q9D883 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
U2af1Q9D883 Gm5312-201ENSMUST00000203728 547 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms