Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Gm17271-201ENSMUST00000165535 355 ntBASIC15.82■□□□□ 0.12
Gm3404Q9D506 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.82■□□□□ 0.12
Gm3404Q9D506 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Gm43767-201ENSMUST00000198933 381 ntBASIC15.82■□□□□ 0.12
Gm3404Q9D506 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Gm45747-201ENSMUST00000212203 999 ntBASIC15.82■□□□□ 0.12
Gm3404Q9D506 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.82■□□□□ 0.12
Gm3404Q9D506 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.82■□□□□ 0.12
Gm3404Q9D506 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3404Q9D506 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gm3404Q9D506 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm3404Q9D506 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.8■□□□□ 0.12
Gm3404Q9D506 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.8■□□□□ 0.12
Gm3404Q9D506 Gm10154-201ENSMUST00000084445 354 ntBASIC15.8■□□□□ 0.12
Gm3404Q9D506 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm3404Q9D506 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Gm16198-201ENSMUST00000118766 670 ntBASIC15.79■□□□□ 0.12
Gm3404Q9D506 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm3404Q9D506 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.79■□□□□ 0.12
Gm3404Q9D506 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm3404Q9D506 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Gm3404Q9D506 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Gm3404Q9D506 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Gm3404Q9D506 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm3404Q9D506 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Gm3404Q9D506 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms