Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap53Q9D439 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap53Q9D439 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cfap53Q9D439 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap53Q9D439 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap53Q9D439 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.34■□□□□ 0.21
Cfap53Q9D439 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Cfap53Q9D439 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap53Q9D439 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap53Q9D439 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap53Q9D439 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap53Q9D439 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap53Q9D439 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap53Q9D439 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.33■□□□□ 0.21
Cfap53Q9D439 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap53Q9D439 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.21
Cfap53Q9D439 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap53Q9D439 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap53Q9D439 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap53Q9D439 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap53Q9D439 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap53Q9D439 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap53Q9D439 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cfap53Q9D439 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.33■□□□□ 0.2
Cfap53Q9D439 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.33■□□□□ 0.2
Cfap53Q9D439 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.33■□□□□ 0.2
Cfap53Q9D439 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap53Q9D439 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Gm27300-201ENSMUST00000184085 97 ntBASIC16.32■□□□□ 0.2
Cfap53Q9D439 Gm27335-201ENSMUST00000184758 97 ntBASIC16.32■□□□□ 0.2
Cfap53Q9D439 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
Cfap53Q9D439 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Cfap53Q9D439 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.32■□□□□ 0.2
Cfap53Q9D439 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.32■□□□□ 0.2
Cfap53Q9D439 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap53Q9D439 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.31■□□□□ 0.2
Cfap53Q9D439 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.31■□□□□ 0.2
Cfap53Q9D439 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.31■□□□□ 0.2
Cfap53Q9D439 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.31■□□□□ 0.2
Cfap53Q9D439 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.31■□□□□ 0.2
Cfap53Q9D439 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms