Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssbp3Q9D032 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Mir1895-201ENSMUST00000122615 79 ntBASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp3Q9D032 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Gm11025-201ENSMUST00000140773 466 ntBASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Gm27494-201ENSMUST00000184735 189 ntBASIC12.4□□□□□ -0.42
Ssbp3Q9D032 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssbp3Q9D032 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Ssbp3Q9D032 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Gm16198-201ENSMUST00000118766 670 ntBASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.39□□□□□ -0.43
Ssbp3Q9D032 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms