Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Smc3Q9CW03 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Gm37153-201ENSMUST00000193637 231 ntBASIC17.52■□□□□ 0.4
Smc3Q9CW03 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.52■□□□□ 0.4
Smc3Q9CW03 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.52■□□□□ 0.39
Smc3Q9CW03 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Smc3Q9CW03 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smc3Q9CW03 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smc3Q9CW03 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smc3Q9CW03 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smc3Q9CW03 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.51■□□□□ 0.39
Smc3Q9CW03 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.51■□□□□ 0.39
Smc3Q9CW03 Gm9682-201ENSMUST00000197505 556 ntBASIC17.51■□□□□ 0.39
Smc3Q9CW03 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc3Q9CW03 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Gm25990-201ENSMUST00000102440 86 ntBASIC17.5■□□□□ 0.39
Smc3Q9CW03 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Gm5682-201ENSMUST00000173402 505 ntBASIC17.5■□□□□ 0.39
Smc3Q9CW03 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.5■□□□□ 0.39
Smc3Q9CW03 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.5■□□□□ 0.39
Smc3Q9CW03 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc3Q9CW03 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Gm43347-201ENSMUST00000200226 580 ntBASIC17.49■□□□□ 0.39
Smc3Q9CW03 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc3Q9CW03 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms