Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Gm7862-201ENSMUST00000121461 292 ntBASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.18□□□□□ -0.46
H2afb1Q9CQ70 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
H2afb1Q9CQ70 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Gm15173-201ENSMUST00000122049 433 ntBASIC12.16□□□□□ -0.46
H2afb1Q9CQ70 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms