Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ska1Q9CPV1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Gm12644-201ENSMUST00000119935 606 ntBASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Gm23547-201ENSMUST00000158210 271 ntBASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Gm18669-201ENSMUST00000216049 778 ntBASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ska1Q9CPV1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Grk6-207ENSMUST00000225925 2769 ntBASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ska1Q9CPV1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms