Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.52□□□□□ -0.09
Msh4Q99MT2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Msh4Q99MT2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh4Q99MT2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh4Q99MT2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Msh4Q99MT2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh4Q99MT2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Msh4Q99MT2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Msh4Q99MT2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh4Q99MT2 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.51□□□□□ -0.09
Msh4Q99MT2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Gm27300-201ENSMUST00000184085 97 ntBASIC14.51□□□□□ -0.09
Msh4Q99MT2 Gm27335-201ENSMUST00000184758 97 ntBASIC14.51□□□□□ -0.09
Msh4Q99MT2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.51□□□□□ -0.09
Msh4Q99MT2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.51□□□□□ -0.09
Msh4Q99MT2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Gm14722-201ENSMUST00000118943 689 ntBASIC14.5□□□□□ -0.09
Msh4Q99MT2 Gm11594-201ENSMUST00000122313 162 ntBASIC14.5□□□□□ -0.09
Msh4Q99MT2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.5□□□□□ -0.09
Msh4Q99MT2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.5□□□□□ -0.09
Msh4Q99MT2 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.5□□□□□ -0.09
Msh4Q99MT2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh4Q99MT2 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.49□□□□□ -0.09
Msh4Q99MT2 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.49□□□□□ -0.09
Msh4Q99MT2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.49□□□□□ -0.09
Msh4Q99MT2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.49□□□□□ -0.09
Msh4Q99MT2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh4Q99MT2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh4Q99MT2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh4Q99MT2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh4Q99MT2 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.48□□□□□ -0.09
Msh4Q99MT2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Msh4Q99MT2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh4Q99MT2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh4Q99MT2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh4Q99MT2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms