Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Efs-202ENSMUST00000227037 2540 ntBASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Gm5479-201ENSMUST00000160578 435 ntBASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Gm6736-201ENSMUST00000166583 948 ntBASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Gm27920-201ENSMUST00000183953 96 ntBASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.48■□□□□ 0.07
Tpgs1Q99MS8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Gm2810-201ENSMUST00000118681 990 ntBASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Gm14822-201ENSMUST00000122247 291 ntBASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Gm27702-201ENSMUST00000184512 56 ntBASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpgs1Q99MS8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Gm18889-201ENSMUST00000174284 929 ntBASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Gm9182-201ENSMUST00000217829 639 ntBASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Chchd1-203ENSMUST00000224633 557 ntBASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Tpgs1Q99MS8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms