Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Gm6257-201ENSMUST00000163864 910 ntBASIC13.06□□□□□ -0.32
Scrt1Q99M85 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.06□□□□□ -0.32
Scrt1Q99M85 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Scrt1Q99M85 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.05□□□□□ -0.32
Scrt1Q99M85 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.05□□□□□ -0.32
Scrt1Q99M85 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Gm27989-201ENSMUST00000184721 107 ntBASIC13.05□□□□□ -0.32
Scrt1Q99M85 Gm17837-201ENSMUST00000186435 985 ntBASIC13.05□□□□□ -0.32
Scrt1Q99M85 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.05□□□□□ -0.32
Scrt1Q99M85 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scrt1Q99M85 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.05□□□□□ -0.32
Scrt1Q99M85 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms