Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clcc1Q99LI2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clcc1Q99LI2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.7□□□□□ -0.06
Clcc1Q99LI2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clcc1Q99LI2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.7□□□□□ -0.06
Clcc1Q99LI2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clcc1Q99LI2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Clcc1Q99LI2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Gm7774-201ENSMUST00000200064 533 ntBASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Sybu-209ENSMUST00000228639 4113 ntBASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clcc1Q99LI2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Mir449b-201ENSMUST00000104833 80 ntBASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Gm6973-201ENSMUST00000117080 721 ntBASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clcc1Q99LI2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clcc1Q99LI2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Clcc1Q99LI2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms