Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Gm23984-201ENSMUST00000157139 203 ntBASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Gm11478-201ENSMUST00000117851 599 ntBASIC14.86□□□□□ -0.03
Cstf1Q99LC2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Gm27533-201ENSMUST00000183800 152 ntBASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Gm27680-201ENSMUST00000184192 160 ntBASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Gm45384-201ENSMUST00000210451 277 ntBASIC14.86□□□□□ -0.03
Cstf1Q99LC2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cstf1Q99LC2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Gm27920-201ENSMUST00000183953 96 ntBASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.85□□□□□ -0.03
Cstf1Q99LC2 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cstf1Q99LC2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.85□□□□□ -0.03
Cstf1Q99LC2 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms