Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Gm15590-201ENSMUST00000078419 552 ntBASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Gm37153-201ENSMUST00000193637 231 ntBASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Gm18206-201ENSMUST00000207027 926 ntBASIC14.36□□□□□ -0.11
Vmp1Q99KU0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vmp1Q99KU0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Gm1401-201ENSMUST00000122048 772 ntBASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmp1Q99KU0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Gm5682-201ENSMUST00000173402 505 ntBASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms