Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd2Q99JR8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd2Q99JR8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd2Q99JR8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd2Q99JR8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd2Q99JR8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smarcd2Q99JR8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Smarcd2Q99JR8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd2Q99JR8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Gm29667-201ENSMUST00000190817 490 ntBASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Gm16476-201ENSMUST00000221544 139 ntBASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd2Q99JR8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Gm2451-201ENSMUST00000199447 999 ntBASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Gm10290-201ENSMUST00000200451 999 ntBASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Dupd1-202ENSMUST00000224735 548 ntBASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd2Q99JR8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcd2Q99JR8 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcd2Q99JR8 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.96□□□□□ -0.02
Smarcd2Q99JR8 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcd2Q99JR8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcd2Q99JR8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Smarcd2Q99JR8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcd2Q99JR8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcd2Q99JR8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Gm12859-201ENSMUST00000117834 427 ntBASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Gm4875-201ENSMUST00000118257 786 ntBASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Gm27631-201ENSMUST00000184163 466 ntBASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Gm9794-201ENSMUST00000202370 423 ntBASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Gm7653-201ENSMUST00000214567 508 ntBASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Gm6218-201ENSMUST00000219812 628 ntBASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd2Q99JR8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms