Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cdk9Q99J95 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk9Q99J95 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk9Q99J95 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Cdk9Q99J95 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cdk9Q99J95 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Cdk9Q99J95 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk9Q99J95 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cdk9Q99J95 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cdk9Q99J95 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk9Q99J95 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk9Q99J95 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.02■□□□□ -0
Cdk9Q99J95 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk9Q99J95 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdk9Q99J95 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Cdk9Q99J95 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.02■□□□□ -0
Cdk9Q99J95 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk9Q99J95 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.02■□□□□ -0
Cdk9Q99J95 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk9Q99J95 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk9Q99J95 Gm10819-201ENSMUST00000099988 561 ntBASIC15.02■□□□□ -0
Cdk9Q99J95 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk9Q99J95 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.02□□□□□ -0.01
Cdk9Q99J95 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk9Q99J95 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk9Q99J95 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk9Q99J95 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk9Q99J95 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk9Q99J95 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk9Q99J95 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Cdk9Q99J95 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk9Q99J95 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk9Q99J95 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk9Q99J95 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.01□□□□□ -0.01
Cdk9Q99J95 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Gm12008-201ENSMUST00000117791 755 ntBASIC15.01□□□□□ -0.01
Cdk9Q99J95 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.01□□□□□ -0.01
Cdk9Q99J95 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.01□□□□□ -0.01
Cdk9Q99J95 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.01□□□□□ -0.01
Cdk9Q99J95 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk9Q99J95 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cdk9Q99J95 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdk9Q99J95 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cdk9Q99J95 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cdk9Q99J95 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms