Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col20a1Q923P0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col20a1Q923P0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col20a1Q923P0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col20a1Q923P0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Col20a1Q923P0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col20a1Q923P0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col20a1Q923P0 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.52■□□□□ 0.39
Col20a1Q923P0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col20a1Q923P0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Col20a1Q923P0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col20a1Q923P0 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.52■□□□□ 0.39
Col20a1Q923P0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col20a1Q923P0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.5■□□□□ 0.39
Col20a1Q923P0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.5■□□□□ 0.39
Col20a1Q923P0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col20a1Q923P0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.49■□□□□ 0.39
Col20a1Q923P0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Gm13823-201ENSMUST00000119930 345 ntBASIC17.49■□□□□ 0.39
Col20a1Q923P0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col20a1Q923P0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col20a1Q923P0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col20a1Q923P0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col20a1Q923P0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col20a1Q923P0 Gm13453-201ENSMUST00000118708 357 ntBASIC17.48■□□□□ 0.39
Col20a1Q923P0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Col20a1Q923P0 Gm17837-201ENSMUST00000186435 985 ntBASIC17.48■□□□□ 0.39
Col20a1Q923P0 Gm7063-201ENSMUST00000186840 981 ntBASIC17.48■□□□□ 0.39
Col20a1Q923P0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col20a1Q923P0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col20a1Q923P0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col20a1Q923P0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms