Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.16□□□□□ -0.3
Chmp1aQ921W0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1aQ921W0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Gm6433-201ENSMUST00000118634 875 ntBASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Gm45328-201ENSMUST00000210942 917 ntBASIC13.15□□□□□ -0.3
Chmp1aQ921W0 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1aQ921W0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Chmp1aQ921W0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Gm15565-201ENSMUST00000118890 427 ntBASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Gm5587-201ENSMUST00000206270 674 ntBASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Chmp1aQ921W0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms