Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha3Q91Y16 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdha3Q91Y16 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha3Q91Y16 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pcdha3Q91Y16 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha3Q91Y16 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha3Q91Y16 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha3Q91Y16 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha3Q91Y16 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha3Q91Y16 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdha3Q91Y16 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha3Q91Y16 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha3Q91Y16 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha3Q91Y16 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Gm17271-201ENSMUST00000165535 355 ntBASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Gm37935-201ENSMUST00000192012 982 ntBASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdha3Q91Y16 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha3Q91Y16 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Gm13597-201ENSMUST00000121239 375 ntBASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Gm11594-201ENSMUST00000122313 162 ntBASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms