Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Rprl3-201ENSMUST00000157400 290 ntBASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Gm36991-201ENSMUST00000191800 648 ntBASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb3Q91XZ7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Gm7461-201ENSMUST00000058918 827 ntBASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb3Q91XZ7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms