Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhga11Q91XY8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga11Q91XY8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Pcdhga11Q91XY8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga11Q91XY8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga11Q91XY8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga11Q91XY8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga11Q91XY8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga11Q91XY8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdhga11Q91XY8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdhga11Q91XY8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Gm11764-201ENSMUST00000120221 623 ntBASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga11Q91XY8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Gm2651-201ENSMUST00000203560 838 ntBASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga11Q91XY8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Gm9682-201ENSMUST00000197505 556 ntBASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.38□□□□□ -0.11
Pcdhga11Q91XY8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms