Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Gm15693-201ENSMUST00000120470 637 ntBASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga6Q91XY2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga6Q91XY2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Pcdhga6Q91XY2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga6Q91XY2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga6Q91XY2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga6Q91XY2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga6Q91XY2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Gm9385-201ENSMUST00000117563 472 ntBASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Gm13223-201ENSMUST00000118609 747 ntBASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Gm27989-201ENSMUST00000184721 107 ntBASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Gm17837-201ENSMUST00000186435 985 ntBASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga6Q91XY2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Gm2272-201ENSMUST00000194903 582 ntBASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhga6Q91XY2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Gm13453-201ENSMUST00000118708 357 ntBASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Gm16198-201ENSMUST00000118766 670 ntBASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Gm18737-201ENSMUST00000173594 937 ntBASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Gm27618-201ENSMUST00000183671 60 ntBASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Gm18187-201ENSMUST00000196476 984 ntBASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhga6Q91XY2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms