Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.48□□□□□ -0.41
H1fooQ8VIK3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Gm43767-201ENSMUST00000198933 381 ntBASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 AV026068-213ENSMUST00000223675 1171 ntBASIC12.47□□□□□ -0.41
H1fooQ8VIK3 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
H1fooQ8VIK3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H1fooQ8VIK3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
H1fooQ8VIK3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H1fooQ8VIK3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H1fooQ8VIK3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
H1fooQ8VIK3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H1fooQ8VIK3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H1fooQ8VIK3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
H1fooQ8VIK3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
H1fooQ8VIK3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H1fooQ8VIK3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
H1fooQ8VIK3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H1fooQ8VIK3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
H1fooQ8VIK3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
H1fooQ8VIK3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
H1fooQ8VIK3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
H1fooQ8VIK3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H1fooQ8VIK3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
H1fooQ8VIK3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
H1fooQ8VIK3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H1fooQ8VIK3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H1fooQ8VIK3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
H1fooQ8VIK3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
H1fooQ8VIK3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
H1fooQ8VIK3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
H1fooQ8VIK3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H1fooQ8VIK3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
H1fooQ8VIK3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H1fooQ8VIK3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
H1fooQ8VIK3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H1fooQ8VIK3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.45□□□□□ -0.42
H1fooQ8VIK3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H1fooQ8VIK3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H1fooQ8VIK3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.45□□□□□ -0.42
H1fooQ8VIK3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
H1fooQ8VIK3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H1fooQ8VIK3 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.45□□□□□ -0.42
H1fooQ8VIK3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.45□□□□□ -0.42
H1fooQ8VIK3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H1fooQ8VIK3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
H1fooQ8VIK3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H1fooQ8VIK3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
H1fooQ8VIK3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms