Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.8■□□□□ 0.12
TraipQ8VIG6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.8■□□□□ 0.12
TraipQ8VIG6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.8■□□□□ 0.12
TraipQ8VIG6 Gm27680-201ENSMUST00000184192 160 ntBASIC15.8■□□□□ 0.12
TraipQ8VIG6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.8■□□□□ 0.12
TraipQ8VIG6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Gm13823-201ENSMUST00000119930 345 ntBASIC15.79■□□□□ 0.12
TraipQ8VIG6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Gm7063-201ENSMUST00000186840 981 ntBASIC15.79■□□□□ 0.12
TraipQ8VIG6 Olfr286-202ENSMUST00000205305 969 ntBASIC15.79■□□□□ 0.12
TraipQ8VIG6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Gm9182-201ENSMUST00000217829 639 ntBASIC15.79■□□□□ 0.12
TraipQ8VIG6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TraipQ8VIG6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.78■□□□□ 0.12
TraipQ8VIG6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.78■□□□□ 0.12
TraipQ8VIG6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TraipQ8VIG6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms