Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab40cQ8VHQ4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab40cQ8VHQ4 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Rprl3-201ENSMUST00000157400 290 ntBASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Gm45328-201ENSMUST00000210942 917 ntBASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rab40cQ8VHQ4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms