Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.52■□□□□ 0.23
Ddx39aQ8VDW0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Ddx39aQ8VDW0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx39aQ8VDW0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx39aQ8VDW0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx39aQ8VDW0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx39aQ8VDW0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx39aQ8VDW0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ddx39aQ8VDW0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Mir7023-201ENSMUST00000185093 64 ntBASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx39aQ8VDW0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx39aQ8VDW0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Gm8410-201ENSMUST00000117225 605 ntBASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Gm38294-201ENSMUST00000192831 381 ntBASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms