Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Rprl2-201ENSMUST00000157150 290 ntBASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc1Q8VCB1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc1Q8VCB1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc1Q8VCB1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc1Q8VCB1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms