Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Mir5122-201ENSMUST00000175004 89 ntBASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Gm9731-201ENSMUST00000209480 747 ntBASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Gm7114-201ENSMUST00000190159 1789 ntBASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc9Q8VC31 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Gm5422-201ENSMUST00000050717 2721 ntBASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc9Q8VC31 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Gm3375-201ENSMUST00000203929 796 ntBASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc9Q8VC31 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Gm7638-201ENSMUST00000121348 967 ntBASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Gm36967-201ENSMUST00000193814 266 ntBASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Il3ra-202ENSMUST00000223589 738 ntBASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc9Q8VC31 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ccdc9Q8VC31 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc9Q8VC31 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc9Q8VC31 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms